Stem-loop gma-MIR10443

Accession

MI0033513

Description

Glycine max gma-MIR10443 precursor miRNA

Sequence

12062 reads, 25.0 reads per million, 162 experiments

uguuaccgcaUCGACUGAGAACAACAUAAUUCAUgaacucuuauuaauuauuuuauuuauuggaauuaucgucucauuaugaguguuuUUAGAUCACGAGGUAAAA
..(((((.....(((((((((((.((((((..((((..(((.((.(((......))).)).)))....))))...))))))..))))))))).))....)))))..

Structure

ug     gcaUC  -         -A      -UC    --ac   u  u   ua 
  uuacc     GA CUGAGAACA  CAUAAU   AUga    ucu au aau  u
  |||||     || |||||||||  ||||||   ||||    ||| || |||   
  AAUGG     CU GAUUuuugu  guauua   ugcu    agg ua uua  u
AA     -AGCA  A         ga      cuc    auua   u  u   uu 

Annotation confidence Low

Genome context

chr19: 49795077-49795182 [+]

Mature gma-miR10443-5p

• Accession: MIMAT0041721
• Description: Glycine max gma-miR10443-5p mature miRNA
• Sequence: 11 - UCGACUGAGAACAACAUAAUUCAU - 34
• Evidence: experimental ; Illumina [1]

Mature gma-miR10443-3p

• Accession: MIMAT0054560
• Description: Glycine max gma-miR10443-3p mature miRNA
• Sequence: 89 - UUAGAUCACGAGGUAAAA - 106
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562