Stem-loop gma-MIR10444

Accession

MI0033515

Description

Glycine max gma-MIR10444 precursor miRNA

Sequence

7165 reads, 16.0 reads per million, 163 experiments

uuagguuugaguauUUUCGAACUUACAUGUAUGUUAUUauagaaaguaucaagcaauauaaaacaauugaaaaaucugauauuuucuacGACAUACAUGUGAGUUCGGAUGUAcccgaaccua
.((((((((.((((.((((((((((((((((((((....((((((((((((..((((........)))).......)))))))))))).)))))))))))))))))))).)))).))))))))

Structure

u        a    U                    AUUa            -----ag    aua 
 uagguuug guau UUCGAACUUACAUGUAUGUU    uagaaaguauca       caau   a
 |||||||| |||| ||||||||||||||||||||    ||||||||||||       ||||    
 auccaagc cAUG AGGCUUGAGUGUACAUACAG    aucuuuuauagu       guua   a
-        c    U                    ---c            cuaaaaa    aca 

Annotation confidence High

Genome context

chr19: 34578330-34578452 [-]

Mature gma-miR10444-5p

• Accession: MIMAT0054562
• Description: Glycine max gma-miR10444-5p mature miRNA
• Sequence: 15 - UUUCGAACUUACAUGUAUGUUAUU - 38
• Evidence: experimental ; unknown

Mature gma-miR10444-3p

• Accession: MIMAT0041723
• Description: Glycine max gma-miR10444-3p mature miRNA
• Sequence: 90 - GACAUACAUGUGAGUUCGGAUGUA - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562