Stem-loop gma-MIR10193f

Accession

MI0033517

Description

Glycine max gma-MIR10193f precursor miRNA

Sequence

19079 reads, 35.0 reads per million, 172 experiments

accaacauuggcCGUUAACAUCGGUUUUUUacaaaaacugauguuaacuuccaacguuaacauugguuuucUAAAAAAACCAAUGUUAACUGUcaauguuaac
...(((((((((.((((((((((((((((...)))))))))))))))).......(((((((((((((((.....))))))))))))))).)))))))))...

Structure

acc         CGUUAACAUCGGUUUUUUacaaaaacugauguuaacuuccaac               c 
   aacauuggc                                           guuaacauugguuuu U
   |||||||||                                           ||||||||||||||| A
   uuguaacUG                                           CAAUUGUAACCAAAA A
caa         ------------------------------------------U               A 

Annotation confidence Low

Genome context

chr20: 24780549-24780651 [-]

Mature gma-miR10193f-5p

• Accession: MIMAT0054564
• Description: Glycine max gma-miR10193f-5p mature miRNA
• Sequence: 13 - CGUUAACAUCGGUUUUUU - 30
• Evidence: experimental ; unknown

Mature gma-miR10193f-3p

• Accession: MIMAT0041725
• Description: Glycine max gma-miR10193f-3p mature miRNA
• Sequence: 72 - UAAAAAAACCAAUGUUAACUGU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562