Stem-loop gma-MIR10447

Accession

MI0033519

Description

Glycine max gma-MIR10447 precursor miRNA

Sequence

uauuguagguggcugcgacguggaaaucaacauauuggcaaugaugaucuuagaguuuuccgucgcaaauuggaucuaaugaaacaacaugagguaagaacaucguaauguaaugguuaaaugaaauuuuaauauguuauguuugauugaaaauugacaaguguguuguuauaugcaguuugucugggaaccauacacaacaauugugauggcagcguugccuccaauuugugugguuggaaguguagucugguuugcgguggugccacugauuUGUUUCCAUGUUGUUGAGUGACaccaaccuga
....((.(((((((((((((((((((.(((.....(((((...................((((((((((((((((((.(((......))).))........((((.((((((((.((((((......))))))..))))))))))))........(((((((((((......))))).))))))....(((((((((....(((((.((.((((....)))))))))))))))))))).........))))))))))))))))))))).....)))))))))))))))..)))..)))).))....

Structure

uauu  a    --   --            u   cauau     augaugaucuuagaguuuu                cuaaugaaacaacaugagguaagaacaucguaauguaaugguuaaaugaaauuuuaauauguuauguuugauugaaaauugacaaguguguuguuauaugcaguuugucuggg         caac     u  u    g 
    gu ggug  gcu  gcgacguggaaa caa     uggca                   ccgucgcaaauuggau                                                                                                                 aaccauaca    aauug ga ggca c
    || ||||  |||  |||||||||||| |||     |||||                   ||||||||||||||||                                                                                                                 |||||||||    ||||| || ||||  
    ca ccaC  UGA  UGUUGUACCUUU GUu     accgu                   gguggcguuuggucug                                                                                                                 uuggugugu    uuaac cu ccgu g
aguc  a    AG   GU            -   uaguc     -------------------                --------------------------------------------------------------------------------------------------------augugaagg         ----     -  -    u 

Annotation confidence Not enough data

Genome context

chr20: 33668881-33669186 [-]

Mature gma-miR10447

• Accession: MIMAT0041727
• Description: Glycine max gma-miR10447 mature miRNA
• Sequence: 275 - UGUUUCCAUGUUGUUGAGUGAC - 296
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562