Stem-loop abu-mir-10a-2

Accession

MI0033713

Description

Astatotilapia burtoni abu-mir-10a-2 precursor miRNA

Sequence

1383207 reads, 436734.0 reads per million, 1 experiments

UACCCUGUAGAACCGAAUUUGUgugaaguacaagcagucgCAAAUACGUCUCUACAGGAAU
...((((((((..((.(((((((....((....))...))))))).))..))))))))...

Structure

UAC        AC  A       ugaa  a 
   CCUGUAGA  CG AUUUGUg    gu c
   ||||||||  || |||||||    ||  
   GGACAUCU  GC UAAACgc    cg a
UAA        CU  A       -uga  a 

Annotation confidence High

Genome context

JH425329.1: 1782719-1782779 [-]

Mature abu-miR-10a-5p

• Accession: MIMAT0042039
• Description: Astatotilapia burtoni abu-miR-10a-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-10a-2-3p

• Accession: MIMAT0059779
• Description: Astatotilapia burtoni abu-miR-10a-2-3p mature miRNA
• Sequence: 41 - CAAAUACGUCUCUACAGGAAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381