miRBase entry: abu-mir-182

Stem-loop abu-mir-182

Accession

MI0033720

Description

Astatotilapia burtoni abu-mir-182 precursor miRNA

Sequence

UUUGGCAAUGGUAGAACUCACAcuggugagguagauggauccggugguucuagacuugccaacu
.(((((((...((((((...((((((..............))))))))))))...)))))))..

Structure

-U       UGG      UCA      ugaggu 
  UUGGCAA   UAGAAC   CAcugg      a
  |||||||   ||||||   ||||||       
  aaccguu   aucuug   guggcc      g
uc       cag      ---      uaggua

Annotation confidence Not enough data

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Genome context

JH425406.1: 933114-933177 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-182

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature abu-miR-182

Accession	MIMAT0042044
Description	Astatotilapia burtoni abu-miR-182 mature miRNA
Sequence	1 - UUUGGCAAUGGUAGAACUCACA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381