Stem-loop abu-mir-143

Accession

MI0033723

Description

Astatotilapia burtoni abu-mir-143 precursor miRNA

Sequence

ggugcagugcugcaucucuggucaguugguagucUGAGAUGAAGCACUGUAGCUC
(.(((((((((.((((((.((.(........).)))))))).))))))))).)..

Structure

-- g         g      u  u agu 
  g ugcagugcu caucuc gg c   u
  | ||||||||| |||||| || |    
  C AUGUCACGA GUAGAG Uc g   g
CU G         A      -  u aug 

Annotation confidence Not enough data

Genome context

JH425754.1: 192631-192685 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-143

Mature abu-miR-143

• Accession: MIMAT0042047
• Description: Astatotilapia burtoni abu-miR-143 mature miRNA
• Sequence: 35 - UGAGAUGAAGCACUGUAGCUC - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381