Stem-loop abu-mir-204-3

Accession

MI0033725

Description

Astatotilapia burtoni abu-mir-204-3 precursor miRNA

Sequence

45271 reads, 14294.0 reads per million, 1 experiments

UUCCCUUUGUCAUCCUAUGCCUggauuaauacaaaaggggcugggaaggcaaagggacgg
.((((((((((.(((((.((((...............))))))))).))))))))))...

Structure

--U          A     U    ggauua 
   UCCCUUUGUC UCCUA GCCU      a
   |||||||||| ||||| ||||      u
   agggaaacgg agggu cggg      a
ggc          a     -    gaaaac 

Annotation confidence Not enough data

Genome context

JH425372.1: 363531-363590 [-]

Mature abu-miR-204-5p

• Accession: MIMAT0042046
• Description: Astatotilapia burtoni abu-miR-204-5p mature miRNA
• Sequence: 1 - UUCCCUUUGUCAUCCUAUGCCU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381