Stem-loop abu-mir-9-2

Accession

MI0033726

Description

Astatotilapia burtoni abu-mir-9-2 precursor miRNA

Sequence

47585 reads, 15024.0 reads per million, 1 experiments

UCUUUGGUUAUCUAGCUGUAUGaguuuuaauuucaUAAAGCUAGAGAACCGAAAGUA
..(((((((.(((((((.((((((.......)))))).))))))).)))))))....

Structure

--UC       A       G      uu 
    UUUGGUU UCUAGCU UAUGag  u
    ||||||| ||||||| ||||||  u
    AAGCCAA AGAUCGA AUacuu  a
AUGA       G       A      ua 

Annotation confidence High

Genome context

JH425358.1: 886777-886833 [+]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-2-3p

• Accession: MIMAT0059786
• Description: Astatotilapia burtoni abu-miR-9-2-3p mature miRNA
• Sequence: 36 - UAAAGCUAGAGAACCGAAAGUA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381