Stem-loop abu-mir-9-4

Accession

MI0033730

Description

Astatotilapia burtoni abu-mir-9-4 precursor miRNA

Sequence

35360 reads, 11165.0 reads per million, 1 experiments

UCUUUGGUUAUCUAGCUGUAUGagugauguacauucuucAUAAAGCUAGAUAACCGAAAGUa
..(((((((((((((((.((((((.((.......)))))))).)))))))))))))))....

Structure

--UC               G      u  ug 
    UUUGGUUAUCUAGCU UAUGag ga  u
    ||||||||||||||| |||||| ||  a
    AAGCCAAUAGAUCGA AUAcuu cu  c
aUGA               A      -  ua 

Annotation confidence High

Genome context

JH425733.1: 159937-159998 [+]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-3p

• Accession: MIMAT0042049
• Description: Astatotilapia burtoni abu-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381