Stem-loop abu-mir-9-5

Accession

MI0033731

Description

Astatotilapia burtoni abu-mir-9-5 precursor miRNA

Sequence

35361 reads, 11165.0 reads per million, 1 experiments

UCUUUGGUUAUCUAGCUGUAUGaguguuaaauaccugucAUAAAGCUAGAUAACCGAAAGUa
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))....

Structure

--UC               G     ---    u 
    UUUGGUUAUCUAGCU UAUGa   gugu  
    ||||||||||||||| |||||   |||| a
    AAGCCAAUAGAUCGA AUAcu   caua  
aUGA               A     guc    a 

Annotation confidence High

Genome context

JH425676.1: 588234-588295 [-]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-3p

• Accession: MIMAT0042049
• Description: Astatotilapia burtoni abu-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381