Stem-loop abu-mir-9-6

Accession

MI0033732

Description

Astatotilapia burtoni abu-mir-9-6 precursor miRNA

Sequence

UCUUUGGUUAUCUAGCUGUAUGagugauaaucaugcaucaUAAAGCUAGAUAACCGAAAGUA
..(((((((((((((((.(((((((((...))))...))))).)))))))))))))))....

Structure

--UC               G     ---    u 
    UUUGGUUAUCUAGCU UAUGa   guga  
    ||||||||||||||| |||||   |||| a
    AAGCCAAUAGAUCGA AUacu   uacu  
AUGA               A     acg    a 

Annotation confidence Not enough data

Genome context

JH425330.1: 4067288-4067349 [+]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-3p

• Accession: MIMAT0042049
• Description: Astatotilapia burtoni abu-miR-9-3p mature miRNA
• Sequence: 41 - UAAAGCUAGAUAACCGAAAGUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381