Stem-loop abu-mir-199-3

Accession

MI0033735

Description

Astatotilapia burtoni abu-mir-199-3 precursor miRNA

Sequence

CCCAGUGUUCAGACUACCUGUUcaggaaguagugguuguACAGUAGUCUGCACAUUGGUUa
.(((((((.((((((((.(((.(((..........))).))))))))))).)))))))...

Structure

--C       U        C   U   gaag 
   CCAGUGU CAGACUAC UGU cag    u
   ||||||| |||||||| ||| |||     
   GGUUACA GUCUGAUG ACA guu    a
aUU       C        -   u   ggug 

Annotation confidence Not enough data

Genome context

JH425435.1: 800585-800645 [-]

Mature abu-miR-199-5p

• Accession: MIMAT0042050
• Description: Astatotilapia burtoni abu-miR-199-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-199-3p

• Accession: MIMAT0042051
• Description: Astatotilapia burtoni abu-miR-199-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381