Stem-loop abu-mir-199-4

Accession

MI0033740

Description

Astatotilapia burtoni abu-mir-199-4 precursor miRNA

Sequence

CCCAGUGUUCAGACUACCUGUUcaucaggcugcagcugaACAGUAGUCUGCACAUUGGUUa
.(((((((.((((((((.((((((.(........).)))))))))))))).)))))))...

Structure

--C       U        C      u agg 
   CCAGUGU CAGACUAC UGUUca c   c
   ||||||| |||||||| |||||| |    
   GGUUACA GUCUGAUG ACAagu g   u
aUU       C        -      c acg 

Annotation confidence Not enough data

Genome context

JH425657.1: 168627-168687 [-]

Mature abu-miR-199-5p

• Accession: MIMAT0042050
• Description: Astatotilapia burtoni abu-miR-199-5p mature miRNA
• Sequence: 1 - CCCAGUGUUCAGACUACCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-199-3p

• Accession: MIMAT0042051
• Description: Astatotilapia burtoni abu-miR-199-3p mature miRNA
• Sequence: 40 - ACAGUAGUCUGCACAUUGGUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381