Stem-loop abu-mir-92a-2

Accession

MI0033742

Description

Astatotilapia burtoni abu-mir-92a-2 precursor miRNA

Sequence

27823 reads, 8785.0 reads per million, 1 experiments

agguggggaucgguagcaaugcuguguuccuccaggUAUUGCACUUGUCCCGGCCUGU
((((.(((((.(((.((((((((..(.....)..))))))))))).))))).))))..

Structure

--    g     c   a        gu u 
  aggu gggau ggu gcaaugcu  g u
  |||| ||||| ||| ||||||||  | c
  UCCG CCCUG UCA CGUUAUgg  c c
UG    G     U   -        ac u 

Annotation confidence Not enough data

Genome context

JH425469.1: 936505-936562 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from abu-mir-92a-2

Mature abu-miR-92a-3p

• Accession: MIMAT0042053
• Description: Astatotilapia burtoni abu-miR-92a-3p mature miRNA
• Sequence: 37 - UAUUGCACUUGUCCCGGCCUGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381