Stem-loop abu-let-7a-2

Accession

MI0033746

Description

Astatotilapia burtoni abu-let-7a-2 precursor miRNA

Sequence

33718 reads, 10646.0 reads per million, 1 experiments

UGAGGUAGUAGGUUGUAUAGUUuuagggucguacccuuccugucagauaacUAUACAACUUACUGUCUUUCCU
.(((((((((((((((((((((..(((((...)))))...........)))))))))))))))))))))....

Structure

---U                     ---------uu     c 
    GAGGUAGUAGGUUGUAUAGUU           agggu  
    |||||||||||||||||||||           ||||| g
    UUCUGUCAUUCAACAUAUcaa           uccca  
UCCU                     uagacuguccu     u 

Annotation confidence High

Genome context

JH425411.1: 1177736-1177808 [-]

Mature abu-let-7a-5p

• Accession: MIMAT0042056
• Description: Astatotilapia burtoni abu-let-7a-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-let-7a-2-3p

• Accession: MIMAT0059791
• Description: Astatotilapia burtoni abu-let-7a-2-3p mature miRNA
• Sequence: 52 - UAUACAACUUACUGUCUUUCCU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381