Stem-loop abu-let-7a-3

Accession

MI0033747

Description

Astatotilapia burtoni abu-let-7a-3 precursor miRNA

Sequence

UGAGGUAGUAGGUUGUAUAGUUuggugggugggacugcacccugcucaggugauaacuauacagucuauugccuuccc
.(((((((((((((((((((((...((((((((.......))))))))......)))))))))))))))))))))...

Structure

--U                     ---ugg        ac 
   GAGGUAGUAGGUUGUAUAGUU      uggguggg  u
   |||||||||||||||||||||      ||||||||  g
   uuccguuaucugacauaucaa      acucgucc  c
ccc                     uagugg        ca 

Annotation confidence Not enough data

Genome context

JH425329.1: 1039088-1039165 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-let-7a-3

Mature abu-let-7a

• Accession: MIMAT0042056
• Description: Astatotilapia burtoni abu-let-7a mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381