Stem-loop abu-mir-148a

Accession

MI0033769

Description

Astatotilapia burtoni abu-mir-148a precursor miRNA

Sequence

AAGUUCUGUGAUACACUUAGACUcuaacugcccgcagUCAGUGCAUUACAGAACUUUG
((((((((((((.((((..(((((.........).)))))))).))))))))))))..

Structure

--            A    UA    - uaa 
  AAGUUCUGUGAU CACU  GACU c   c
  |||||||||||| ||||  |||| |   u
  UUCAAGACAUUA GUGA  CUga g   g
GU            C    --    c ccc 

Annotation confidence Not enough data

Genome context

JH425363.1: 1985508-1985565 [-]

Mature abu-miR-148a-5p

• Accession: MIMAT0042074
• Description: Astatotilapia burtoni abu-miR-148a-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUUAGACU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-148a-3p

• Accession: MIMAT0042075
• Description: Astatotilapia burtoni abu-miR-148a-3p mature miRNA
• Sequence: 38 - UCAGUGCAUUACAGAACUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381