Stem-loop abu-mir-153a-2

Accession

MI0033774

Description

Astatotilapia burtoni abu-mir-153a-2 precursor miRNA

Sequence

5547 reads, 1751.0 reads per million, 1 experiments

ucauuuuugugauguugcagcuaguaauauaagcccagUUGCAUAGUCACAAAAGUGAUC
(((((((((((((..(((((((.((.......))..)))))))..)))))))))))))..

Structure

--             gu       -a  aa 
  ucauuuuugugau  ugcagcu  gu  u
  |||||||||||||  |||||||  ||  a
  AGUGAAAACACUG  ACGUUga  cg  u
CU             AU       cc  aa 

Annotation confidence Not enough data

Genome context

JH425343.1: 389496-389555 [+]

Mature abu-miR-153a-3p

• Accession: MIMAT0042081
• Description: Astatotilapia burtoni abu-miR-153a-3p mature miRNA
• Sequence: 39 - UUGCAUAGUCACAAAAGUGAUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381