Stem-loop abu-mir-1388

Accession

MI0033783

Description

Astatotilapia burtoni abu-mir-1388 precursor miRNA

Sequence

AGGACUGUCCAACCUGAGAAUGgugauuauaggcucaaucucagguucgucagcccaug
.((.(((.(.(((((((((.((((........)).)).))))))))).).))).))...

Structure

--A  A   U C         A  -  gau 
   GG CUG C AACCUGAGA UG gu   u
   || ||| | ||||||||| || ||    
   cc gac g uuggacucu ac cg   a
gua  c   u c         a  u  gau 

Annotation confidence Not enough data

Genome context

JH425456.1: 1274619-1274677 [-]

Mature abu-miR-1388

• Accession: MIMAT0042086
• Description: Astatotilapia burtoni abu-miR-1388 mature miRNA
• Sequence: 1 - AGGACUGUCCAACCUGAGAAUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381