miRBase entry: abu-mir-214-1

Stem-loop abu-mir-214-1

Accession

MI0033790

Description

Astatotilapia burtoni abu-mir-214-1 precursor miRNA

Sequence

ugccugucuacacuugcugugcagaccuucugcuccuguACAGCAGGCACAGACAGGCAGA
(((((((((...((((((((((((...........))))))))))))...)))))))))..

Structure

--         aca            accu 
  ugccugucu   cuugcugugcag    u
  |||||||||   ||||||||||||    c
  ACGGACAGA   GGACGACAuguc    u
AG         CAC            cucg

Annotation confidence Not enough data

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Genome context

JH425376.1: 693115-693175 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-214-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature abu-miR-214

Accession	MIMAT0042093
Description	Astatotilapia burtoni abu-miR-214 mature miRNA
Sequence	40 - ACAGCAGGCACAGACAGGCAGA - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381