Stem-loop abu-mir-16b

Accession

MI0033804

Description

Astatotilapia burtoni abu-mir-16b precursor miRNA

Sequence

UAGCAGCACGUAAAUAUUGGAGuuaacacucuagcugaagucuccaguauugaucguacugcugaa
((((((.(((..((((((((((.....((((.....).)))))))))))))...))).))))))..

Structure

--      C   -UA          uuaac   - u 
  UAGCAG ACG   AAUAUUGGAG     acu c a
  |||||| |||   ||||||||||     ||| | g
  gucguc ugc   uuaugaccuc     uga g c
aa      a   uag          -----   a u 

Annotation confidence Not enough data

Genome context

JH425654.1: 105165-105230 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-16b

Mature abu-miR-16b

• Accession: MIMAT0042102
• Description: Astatotilapia burtoni abu-miR-16b mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGAG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381