Stem-loop abu-mir-96-2

Accession

MI0033808

Description

Astatotilapia burtoni abu-mir-96-2 precursor miRNA

Sequence

UUUGGCACUAGCACAUUUUUGCUuuguuucuccucuuuugagcaaucauguguggugccaauau
.(((((((((.(((((..((((((...............))))))..))))))))))))))...

Structure

--U         G     UU      uguuuc 
   UUGGCACUA CACAU  UUGCUu      u
   ||||||||| |||||  ||||||      c
   aaccguggu gugua  aacgag      c
uau         -     cu      uuuucu 

Annotation confidence Not enough data

Genome context

JH425488.1: 1132791-1132854 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-96-2

Mature abu-miR-96

• Accession: MIMAT0042105
• Description: Astatotilapia burtoni abu-miR-96 mature miRNA
• Sequence: 1 - UUUGGCACUAGCACAUUUUUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381