Stem-loop abu-mir-456

Accession

MI0033813

Description

Astatotilapia burtoni abu-mir-456 precursor miRNA

Sequence

gcaggcaucuucccagccuacauguagauccaggaaucugCAGGCUGGUUAGAUGGUUGUCA
((((.(((((..(((((((....((((((......)))))))))))))..))))).))))..

Structure

--    g     uc       acau      cc 
  gcag caucu  ccagccu    guagau  a
  |||| |||||  |||||||    ||||||   
  UGUU GUAGA  GGUCGGA    Cgucua  g
AC    G     UU       ----      ag 

Annotation confidence Not enough data

Genome context

JH425927.1: 3914-3975 [+]

Mature abu-miR-456

• Accession: MIMAT0042110
• Description: Astatotilapia burtoni abu-miR-456 mature miRNA
• Sequence: 41 - CAGGCUGGUUAGAUGGUUGUCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381