Stem-loop abu-mir-128-2

Accession

MI0033826

Description

Astatotilapia burtoni abu-mir-128-2 precursor miRNA

Sequence

1636 reads, 517.0 reads per million, 1 experiments

aGGGGGCCGUUACACUGUCAGagauguagucugagggucUCACAGUGAACCGGUCUCUUU
.((((((((...((((((..(((((.(.......).)))))))))))...))))))))..

Structure

-a        UUA      CA     g ag 
  GGGGGCCG   CACUGU  Gagau u  u
  ||||||||   ||||||  ||||| |  c
  UCUCUGGC   GUGACA  CUcug g  u
UU        CAA      --     g ag 

Annotation confidence Not enough data

Genome context

JH425472.1: 1198385-1198444 [-]

Mature abu-miR-128-2-5p

• Accession: MIMAT0059840
• Description: Astatotilapia burtoni abu-miR-128-2-5p mature miRNA
• Sequence: 2 - GGGGGCCGUUACACUGUCAG - 21
• Evidence: experimental ; Illumina [1]

Mature abu-miR-128-3p

• Accession: MIMAT0042118
• Description: Astatotilapia burtoni abu-miR-128-3p mature miRNA
• Sequence: 40 - UCACAGUGAACCGGUCUCUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381