Stem-loop abu-mir-129-1

Accession

MI0033828

Description

Astatotilapia burtoni abu-mir-129-1 precursor miRNA

Sequence

1639 reads, 517.0 reads per million, 1 experiments

CUUUUUGCGGUCUGGGCUUGCUGuucauaacuauuaaucugggAAGCCCUUACCCCAAAAAGCAU
(((((((.(((..((((((.((..................)).))))))..))).)))))))...

Structure

---       C   CU      G  Guucauaa 
   CUUUUUG GGU  GGGCUU CU        c
   ||||||| |||  |||||| ||         
   GAAAAAC CCA  CCCGAA gg        u
UAC       C   UU      g  ucuaauua 

Annotation confidence High

Genome context

AFNZ01069019.1: 758-822 [-]

Mature abu-miR-129-5p

• Accession: MIMAT0042120
• Description: Astatotilapia burtoni abu-miR-129-5p mature miRNA
• Sequence: 1 - CUUUUUGCGGUCUGGGCUUGCUG - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-129-3p

• Accession: MIMAT0059841
• Description: Astatotilapia burtoni abu-miR-129-3p mature miRNA
• Sequence: 44 - AAGCCCUUACCCCAAAAAGCAU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381