Stem-loop abu-mir-460

Accession

MI0033835

Description

Astatotilapia burtoni abu-mir-460 precursor miRNA

Sequence

1353 reads, 427.0 reads per million, 1 experiments

CCUGCAUUGUACACACUGUGCGUauaaaugucauaagCACAGCGCAUACAAUGUGGAUG
.((((((((((..(.((((((.(((.......))).)))))).)..))))))))))...

Structure

--C          CA A      G   aa 
   CUGCAUUGUA  C CUGUGC Uau  a
   ||||||||||  | |||||| |||  u
   GGUGUAACAU  G GACACg aua  g
GUA          AC C      a   cu 

Annotation confidence High

Genome context

JH425323.1: 2303342-2303400 [+]

Mature abu-miR-460-5p

• Accession: MIMAT0059843
• Description: Astatotilapia burtoni abu-miR-460-5p mature miRNA
• Sequence: 1 - CCUGCAUUGUACACACUGUGCGU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-460-3p

• Accession: MIMAT0042124
• Description: Astatotilapia burtoni abu-miR-460-3p mature miRNA
• Sequence: 38 - CACAGCGCAUACAAUGUGGAUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381