Stem-loop abu-mir-138-2

Accession

MI0033845

Description

Astatotilapia burtoni abu-mir-138-2 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCCGcugaagugucacgcacggcuuuuucacaacaccagggu
..(((((((((((((..((((((((((....))).))..))))).)))))))))))))...

Structure

-AG             UC     --  -   a 
   CUGGUGUUGUGAA  AGGCC  Gc uga g
   |||||||||||||  |||||  || |||  
   gaccacaacacuu  uucgg  cg acu u
ugg             -u     ca  c   g 

Annotation confidence Not enough data

Genome context

JH426279.1: 37844-37904 [-]

Mature abu-miR-138

• Accession: MIMAT0042133
• Description: Astatotilapia burtoni abu-miR-138 mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381