Stem-loop abu-mir-499

Accession

MI0033849

Description

Astatotilapia burtoni abu-mir-499 precursor miRNA

Sequence

783 reads, 247.0 reads per million, 1 experiments

UUAAGACUUGCAGUGAUGUUUAgggcaaugaucacaugAACAUCACUUUAAGUCUGUGCU
...(((((((.(((((((((((.(..........).))))))))))).))))))).....

Structure

--UUA       C           g gcaa 
     AGACUUG AGUGAUGUUUA g    u
     ||||||| ||||||||||| |     
     UCUGAAU UCACUACAAgu c    g
UCGUG       U           a acua 

Annotation confidence High

Genome context

JH425331.1: 596524-596583 [+]

Mature abu-miR-499-5p

• Accession: MIMAT0042136
• Description: Astatotilapia burtoni abu-miR-499-5p mature miRNA
• Sequence: 1 - UUAAGACUUGCAGUGAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-499-3p

• Accession: MIMAT0059848
• Description: Astatotilapia burtoni abu-miR-499-3p mature miRNA
• Sequence: 39 - AACAUCACUUUAAGUCUGUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381