Stem-loop abu-let-7b-1

Accession

MI0033851

Description

Astatotilapia burtoni abu-let-7b-1 precursor miRNA

Sequence

633 reads, 200.0 reads per million, 1 experiments

UGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuuaccccaucaggagcuaaCUAUACAACCUACUGCCUUCCc
.(((((((((((((((((((((...((.((.((((........)))).)).)))))))))))))))))))))))...

Structure

--U                     uca  g  g    uuu 
   GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   a
   |||||||||||||||||||||   || || ||||    
   UUCCGUCAUCCAACAUAUCaa   uc ag acua   c
cCC                     ---  g  g    ccc 

Annotation confidence High

Genome context

JH425332.1: 2051009-2051085 [-]

Mature abu-let-7b-1-5p

• Accession: MIMAT0042138
• Description: Astatotilapia burtoni abu-let-7b-1-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUGUGGUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-let-7b-1-3p

• Accession: MIMAT0059849
• Description: Astatotilapia burtoni abu-let-7b-1-3p mature miRNA
• Sequence: 56 - CUAUACAACCUACUGCCUUCC - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381