Stem-loop abu-mir-139

Accession

MI0033863

Description

Astatotilapia burtoni abu-mir-139 precursor miRNA

Sequence

UCUACAGUGCAUGUGUCUCCAGUauguuagugaugcuacuggagacccagcucuguuggaau
(((((((.((.((.((((((((((.((.......)))))))))))).)))).))).))))..

Structure

--    -   U  A  U          u  ua 
  UCUA CAG GC UG GUCUCCAGUa gu  g
  |||| ||| || || |||||||||| ||  u
  aggu guc cg ac cagaggucau cg  g
ua    u   u  -  c          -  ua 

Annotation confidence Not enough data

Genome context

JH425474.1: 406615-406676 [+]

Mature abu-miR-139

• Accession: MIMAT0042148
• Description: Astatotilapia burtoni abu-miR-139 mature miRNA
• Sequence: 1 - UCUACAGUGCAUGUGUCUCCAGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381