Stem-loop abu-mir-24a-4

Accession

MI0033866

Description

Astatotilapia burtoni abu-mir-24a-4 precursor miRNA

Sequence

ugccuacugagcugauaacaguuagauguuaacaagcacUGGCUCAGUUCAGCAGGAAC
..(((.(((((((((.....(((((.((((....)))))))))))))))))).)))...

Structure

-ug   a         uaaca     a    a 
   ccu cugagcuga     guuag uguu a
   ||| |||||||||     ||||| ||||  
   GGA GACUUGACU     CGGUc acga c
CAA   C         -----     -    a 

Annotation confidence Not enough data

Genome context

JH425323.1: 1542025-1542083 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from abu-mir-24a-4

Mature abu-miR-24a

• Accession: MIMAT0042140
• Description: Astatotilapia burtoni abu-miR-24a mature miRNA
• Sequence: 40 - UGGCUCAGUUCAGCAGGAAC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381