Stem-loop abu-mir-155

Accession

MI0033871

Description

Astatotilapia burtoni abu-mir-155 precursor miRNA

Sequence

UUAAUGCUAAUCGUGAUAGGGGUuguucuuauuaacagacaccuaacauguuagcauuagcu
((((((((((.((((.(((((..((((......))))..).)))).))))))))))))))..

Structure

--          U    A    - GU    cu 
  UUAAUGCUAA CGUG UAGG G  uguu  u
  |||||||||| |||| |||| |  ||||   
  gauuacgauu guac aucc c  acaa  a
uc          -    a    a ag    uu 

Annotation confidence Not enough data

Genome context

JH425469.1: 916945-917006 [+]

Mature abu-miR-155

• Accession: MIMAT0042155
• Description: Astatotilapia burtoni abu-miR-155 mature miRNA
• Sequence: 1 - UUAAUGCUAAUCGUGAUAGGGGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381