Stem-loop abu-mir-219-2

Accession

MI0033874

Description

Astatotilapia burtoni abu-mir-219-2 precursor miRNA

Sequence

82 reads, 26.0 reads per million, 1 experiments

UGAUUGUCCAAACGCAAUUCUUgaguaaacucauauucaaccccaAGAAUUGUGUAUGGACAUCUGU
.(((.(((((.((((((((((((....................)))))))))))).))))))))...

Structure

--U   U     A            aguaaacuc 
   GAU GUCCA ACGCAAUUCUUg         a
   ||| ||||| ||||||||||||          
   CUA CAGGU UGUGUUAAGAac         u
UGU   -     A            cccaacuua 

Annotation confidence High

Genome context

JH425577.1: 120999-121065 [-]

Mature abu-miR-219-5p

• Accession: MIMAT0042152
• Description: Astatotilapia burtoni abu-miR-219-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUU - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-219-2-3p

• Accession: MIMAT0059860
• Description: Astatotilapia burtoni abu-miR-219-2-3p mature miRNA
• Sequence: 46 - AGAAUUGUGUAUGGACAUCUGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381