Stem-loop abu-mir-9-7

Accession

MI0033892

Description

Astatotilapia burtoni abu-mir-9-7 precursor miRNA

Sequence

35361 reads, 11165.0 reads per million, 1 experiments

UCUUUGGUUAUCUAGCUGUAUGaguguucugcucgucAUAAAGCUAGAUAACCGAAAGUa
..(((((((((((((((..((((((.....)))))).....)))))))))))))))....

Structure

--UC               ---GU      g 
    UUUGGUUAUCUAGCU     AUGagu u
    |||||||||||||||     |||||| u
    AAGCCAAUAGAUCGA     ugcucg c
aUGA               AAUAc      u 

Annotation confidence High

Genome context

JH425373.1: 1422820-1422879 [+]

Mature abu-miR-9-5p

• Accession: MIMAT0042045
• Description: Astatotilapia burtoni abu-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature abu-miR-9-3p

• Accession: MIMAT0042049
• Description: Astatotilapia burtoni abu-miR-9-3p mature miRNA
• Sequence: 38 - AUAAAGCUAGAUAACCGAAAGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381