Stem-loop abu-mir-124-1

Accession

MI0033894

Description

Astatotilapia burtoni abu-mir-124-1 precursor miRNA

Sequence

4322 reads, 1365.0 reads per million, 1 experiments

CGUGUUCACGGCGGACCUUGAUUuauuagccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..(((((((((((.....))).))))))))..))).)))))))).

Structure

C        G   GA        -   u 
 GUGUUCAC GCG  CCUUGAUU uau a
 |||||||| |||  |||||||| ||| g
 CGUAAGUG CGC  GGAAUuaa aua c
C        G   AC        c   c 

Annotation confidence Not enough data

Genome context

JH425442.1: 570541-570598 [+]

Mature abu-miR-124-1-5p

• Accession: MIMAT0059867
• Description: Astatotilapia burtoni abu-miR-124-1-5p mature miRNA
• Sequence: 1 - CGUGUUCACGGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-124-3p

• Accession: MIMAT0042170
• Description: Astatotilapia burtoni abu-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381