miRBase entry: abu-mir-19b-2

Stem-loop abu-mir-19b-2


Accession
MI0033901
Description
Astatotilapia burtoni abu-mir-19b-2 precursor miRNA


Sequence

4839 reads, 1528.0 reads per million, 1 experiments
uaguuuugcugguuugcuuucagcuuuuaaauguacugcUGUGCAAAUCCAUGCAAAACUG
(((((((((((((((((...((((.............)))).))))).))).)))))))))

Structure
         -   -     uuu    uuuua 
uaguuuugc ugg uuugc   cagc     a
||||||||| ||| |||||   ||||     a
GUCAAAACG ACC AAACG   GUcg     u
         U   U     --U    ucaug 


Annotation confidence Not enough data
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Genome context
JH425363.1: 1164933-1164993 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from abu-mir-19b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature abu-miR-19b-3p

Accession MIMAT0042100
Description Astatotilapia burtoni abu-miR-19b-3p mature miRNA
Sequence 40 - UGUGCAAAUCCAUGCAAAACUG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381