Stem-loop abu-mir-29a-2

Accession

MI0033906

Description

Astatotilapia burtoni abu-mir-29a-2 precursor miRNA

Sequence

accgauuucuuucgguguucagagucugcuucuguuucUAGCACCAUUUGAAAUCGGUUA
(((((((((....((((((.((((...((....))))))))))))....)))))))))..

Structure

--         uuuc      c    ucu  u 
  accgauuuc    gguguu agag   gc u
  |||||||||    |||||| ||||   ||  
  UGGCUAAAG    CCACGA Ucuu   ug c
AU         UUUA      -    ---  u 

Annotation confidence Not enough data

Genome context

JH425347.1: 2505269-2505328 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-29a-2

Mature abu-miR-29a

• Accession: MIMAT0042165
• Description: Astatotilapia burtoni abu-miR-29a mature miRNA
• Sequence: 39 - UAGCACCAUUUGAAAUCGGUUA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381