Stem-loop abu-mir-124-3

Accession

MI0033909

Description

Astatotilapia burtoni abu-mir-124-3 precursor miRNA

Sequence

4364 reads, 1378.0 reads per million, 1 experiments

UGUGUUCACAGUGGACCUUGAUUuaauuucaauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((............))))))))..))).)))))))).

Structure

U        A   GA        uaauu 
 GUGUUCAC GUG  CCUUGAUU     u
 |||||||| |||  ||||||||      
 CGUAAGUG CGC  GGAAUuaa     c
C        G   AC        cauaa 

Annotation confidence High

Genome context

JH425393.1: 948128-948185 [-]

Mature abu-miR-124-3-5p

• Accession: MIMAT0059868
• Description: Astatotilapia burtoni abu-miR-124-3-5p mature miRNA
• Sequence: 1 - UGUGUUCACAGUGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-124-3p

• Accession: MIMAT0042170
• Description: Astatotilapia burtoni abu-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381