Stem-loop abu-mir-124-5

Accession

MI0033912

Description

Astatotilapia burtoni abu-mir-124-5 precursor miRNA

Sequence

4509 reads, 1424.0 reads per million, 1 experiments

CGUGUUCACAGCGGACCUUGAUUuaauguccauacaauUAAGGCACGCGGUGAAUGCC
.((((((((.(((..((((((((............))))))))..))).)))))))).

Structure

C        A   GA        uaaug 
 GUGUUCAC GCG  CCUUGAUU     u
 |||||||| |||  ||||||||      
 CGUAAGUG CGC  GGAAUuaa     c
C        G   AC        cauac 

Annotation confidence High

Genome context

JH425456.1: 1037212-1037269 [+]

Mature abu-miR-124-5p

• Accession: MIMAT0059866
• Description: Astatotilapia burtoni abu-miR-124-5p mature miRNA
• Sequence: 1 - CGUGUUCACAGCGGACCUUGAUU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-124-3p

• Accession: MIMAT0042170
• Description: Astatotilapia burtoni abu-miR-124-3p mature miRNA
• Sequence: 39 - UAAGGCACGCGGUGAAUGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381