Stem-loop abu-mir-726

Accession

MI0033924

Description

Astatotilapia burtoni abu-mir-726 precursor miRNA

Sequence

450 reads, 142.0 reads per million, 1 experiments

ggaAUUCCGCUAGUUCUGAACUAUUcguguuugucaaaagUUCACUACUAGCAGAACUCAGA
.((.(((.((((((..((((((................))))))..)))))).))).))...

Structure

--g  A   C      UC      AUUcgug 
   ga UUC GCUAGU  UGAACU       u
   || ||| ||||||  ||||||        
   CU AAG CGAUCA  ACUUga       u
AGA  C   A      UC      aaacugu 

Annotation confidence Medium

Genome context

JH425331.1: 435960-436021 [+]

Mature abu-miR-726-5p

• Accession: MIMAT0059877
• Description: Astatotilapia burtoni abu-miR-726-5p mature miRNA
• Sequence: 4 - AUUCCGCUAGUUCUGAACUAUU - 25
• Evidence: experimental ; Illumina [1]

Mature abu-miR-726-3p

• Accession: MIMAT0042187
• Description: Astatotilapia burtoni abu-miR-726-3p mature miRNA
• Sequence: 41 - UUCACUACUAGCAGAACUCAGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381