Stem-loop abu-mir-153c

Accession

MI0033934

Description

Astatotilapia burtoni abu-mir-153c precursor miRNA

Sequence

144 reads, 45.0 reads per million, 1 experiments

gucauuuuugugguuugcagcuaguacucuggcuccagUUGCAUAGUCAUAAAAAUGAGC
.((((((((((((((((((((((((......)))..))))))).))))))))))))))..

Structure

-g              -       --   ac 
  ucauuuuugugguu ugcagcu  agu  u
  |||||||||||||| |||||||  |||   
  AGUAAAAAUACUGA ACGUUga  ucg  c
CG              U       cc   gu 

Annotation confidence Not enough data

Genome context

JH425344.1: 2887450-2887509 [+]

Mature abu-miR-153c-3p

• Accession: MIMAT0042195
• Description: Astatotilapia burtoni abu-miR-153c-3p mature miRNA
• Sequence: 39 - UUGCAUAGUCAUAAAAAUGAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381