Stem-loop abu-mir-181b

Accession

MI0033948

Description

Astatotilapia burtoni abu-mir-181b precursor miRNA

Sequence

3077 reads, 972.0 reads per million, 1 experiments

AACAUUCAUUGCUGUCGCUGGGUuggacuguguagaaaagcucacugaacaaugagugcaac
..(((((((((...(((.((((((...((....))...)))))).))).)))))))))....

Structure

--AA         CUG   C      gga  g 
    CAUUCAUUG   UCG UGGGUu   cu u
    |||||||||   ||| ||||||   ||  
    gugaguaac   agu acucga   ga g
caac         --a   c      aaa  u 

Annotation confidence Not enough data

Genome context

JH425358.1: 426121-426182 [-]

Mature abu-miR-181b-5p

• Accession: MIMAT0042211
• Description: Astatotilapia burtoni abu-miR-181b-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGCUGGGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381