miRBase entry: abu-mir-3120

Accession

MI0033965

Description

Astatotilapia burtoni abu-mir-3120 precursor miRNA

Sequence

cugucugugccugcuguacagguuggaggauauucUGCACAGCAAGUGUAGAUAGGC
((((((((((.((((((.((((.((.....)).)))).)))))).))))))))))..

Structure

--          c      a    u  g 
  cugucugugc ugcugu cagg ug a
  |||||||||| |||||| |||| || g
  GAUAGAUGUG ACGACA GUcu au g
CG          A      C    u  a

Annotation confidence Not enough data

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Genome context

JH425511.1: 201546-201602 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from abu-mir-3120

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Accession	MIMAT0042230
Description	Astatotilapia burtoni abu-miR-3120 mature miRNA
Sequence	36 - UGCACAGCAAGUGUAGAUAGGC - 57
Evidence	experimental Illumina [1]

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381