Stem-loop abu-mir-10549

Accession

MI0033975

Description

Astatotilapia burtoni abu-mir-10549 precursor miRNA

Sequence

cccuguauugcugauuaccuuguggucuuccuguUAGGUAAUCAACAAUCCAGGACa
.((((.((((.(((((((((...((....))....))))))))).)))).))))...

Structure

--c    u    c         -ugu  u 
   ccug auug ugauuaccu    gg c
   |||| |||| |||||||||    ||  
   GGAC UAAC ACUAAUGGA    cc u
aCA    C    A         Uugu  u 

Annotation confidence Not enough data

Genome context

JH425390.1: 2225419-2225475 [+]

Mature abu-miR-10549

• Accession: MIMAT0042241
• Description: Astatotilapia burtoni abu-miR-10549 mature miRNA
• Sequence: 35 - UAGGUAAUCAACAAUCCAGGAC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381