Stem-loop abu-mir-10553

Accession

MI0033979

Description

Astatotilapia burtoni abu-mir-10553 precursor miRNA

Sequence

GUGCCAUAUCUGACUGUACGCAauuguaucauuauauugcguuaucagcgauauag
.....(((((.(.(((.(((((((.(((....))))))))))...)))))))))..

Structure

GUGCC     U A   --U       u   u 
     AUAUC G CUG   ACGCAau gua c
     ||||| | |||   ||||||| |||  
     uauag c gac   ugcguua uau a
---ga     - -   uau       -   u 

Annotation confidence Not enough data

Genome context

JH425777.1: 372810-372865 [+]

Mature abu-miR-10553

• Accession: MIMAT0042246
• Description: Astatotilapia burtoni abu-miR-10553 mature miRNA
• Sequence: 1 - GUGCCAUAUCUGACUGUACGCA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381