Stem-loop abu-mir-29d

Accession

MI0033982

Description

Astatotilapia burtoni abu-mir-29d precursor miRNA

Sequence

acugguuucagauggugucuuagaguacaaaauaccaucUAGCACCAUUUGAAAUCGGUGUU
((((((((((((((((((..(((((((.....)))..))))))))))))))))))))))...

Structure

---                  cu    --   c 
   acugguuucagauggugu  uaga  gua a
   ||||||||||||||||||  ||||  ||| a
   UGGCUAAAGUUUACCACG  AUcu  cau a
UUG                  --    ac   a 

Annotation confidence Not enough data

Genome context

JH425342.1: 2343223-2343284 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-29d

Mature abu-miR-29d

• Accession: MIMAT0042249
• Description: Astatotilapia burtoni abu-miR-29d mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCGGUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381