Stem-loop abu-mir-181c

Accession

MI0033987

Description

Astatotilapia burtoni abu-mir-181c precursor miRNA

Sequence

49987 reads, 15783.0 reads per million, 1 experiments

AACAUUCAUUGCUGUCGGUGGGUuugcagcagaauaaCUCACUGAUCAAUGAAUGCAG
..(((((((((..(((((((((((...........))))))))))))))))))))...

Structure

-AA         CU           ugca 
   CAUUCAUUG  GUCGGUGGGUu    g
   |||||||||  |||||||||||    c
   GUAAGUAAC  UAGUCACUCaa    a
GAC         --           uaag 

Annotation confidence High

Genome context

JH425592.1: 654363-654420 [+]

Mature abu-miR-181c-5p

• Accession: MIMAT0042253
• Description: Astatotilapia burtoni abu-miR-181c-5p mature miRNA
• Sequence: 1 - AACAUUCAUUGCUGUCGGUGGGU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-181c-3p

• Accession: MIMAT0059886
• Description: Astatotilapia burtoni abu-miR-181c-3p mature miRNA
• Sequence: 38 - CUCACUGAUCAAUGAAUGCAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381