Stem-loop abu-mir-152

Accession

MI0033988

Description

Astatotilapia burtoni abu-mir-152 precursor miRNA

Sequence

6931 reads, 2188.0 reads per million, 1 experiments

AAGUUCUGUGAUACACUCUGACUgugaaucugugcuagUCAGUGCAUAACAGAACUUUG
(((((((((.((.((((..((((((........)).)))))))).)).)))))))))..

Structure

--         G  A    CU    -  gaa 
  AAGUUCUGU AU CACU  GACU gu   u
  ||||||||| || ||||  |||| ||    
  UUCAAGACA UA GUGA  CUga cg   c
GU         A  C    --    u  ugu 

Annotation confidence High

Genome context

JH426033.1: 100841-100899 [-]

Mature abu-miR-152-5p

• Accession: MIMAT0059887
• Description: Astatotilapia burtoni abu-miR-152-5p mature miRNA
• Sequence: 1 - AAGUUCUGUGAUACACUCUGACU - 23
• Evidence: experimental ; Illumina [1]

Mature abu-miR-152-3p

• Accession: MIMAT0042254
• Description: Astatotilapia burtoni abu-miR-152-3p mature miRNA
• Sequence: 39 - UCAGUGCAUAACAGAACUUUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381