Stem-loop abu-mir-10554-2

Accession

MI0033996

Description

Astatotilapia burtoni abu-mir-10554-2 precursor miRNA

Sequence

UCAGUGGAUCUGUGCUCGACAGUgcagccuaggcagaguagucgaacgcaaauccucuga
((((.((((.((((.(((((..(((.((....))...)))))))).)))).)))).))))

Structure

    U    C    C     AG   --a  c 
UCAG GGAU UGUG UCGAC  Ugc   gc u
|||| |||| |||| |||||  |||   ||  
aguc ccua acgc agcug  aug   cg a
    u    a    a     --   aga  g 

Annotation confidence Not enough data

Genome context

JH425578.1: 381090-381149 [-]

Mature abu-miR-10554

• Accession: MIMAT0042261
• Description: Astatotilapia burtoni abu-miR-10554 mature miRNA
• Sequence: 1 - UCAGUGGAUCUGUGCUCGACAGU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381